Sem Software For Mac Image Tif

A TIF file is an image file saved in a high-quality graphics format. It is often used for storing images with many colors, typically digital photos, and includes support for layers and multiple pages.

Adobe creative suite 4 upgrade. Introduction Scanning electron microscopy (SEM) is a powerful technique that is regularly used by chemists and other scientists to characterize an array of physical properties of a wide range of solid materials. TIFF stands for. Other than the image itself, the software can insert multiple tags with additional information, such as objective settings, acceleration voltage, stage position, etc. Timely recording of the experimental conditions is very important, so this feature of TIFF files is potentially very useful.

This post will demonstrate a method to extract TIFF tags from SEM micrographs using the R programming language. The method is particularly well-suited for SEM micrographs recorded using the SmartSEM® Operating Software. Unfortunately, the offers no download link to the software manual nor any other documentation on the software’s capabilities. And after perusing the SmartSEM® V05.06 and V05.04 software manuals, I found no description of the tags that the SEM software demonstrably attaches to the TIFF images. But the manual does note that “images in BMP and JPEG format cannot be reloaded to the SmartSEM® user interface. Besides, it is not possible to save additional information with the image”.

And in table 2.2 (“Available licenses”) of the manual, we learn of a “SmartSEM report generator” that “enables an Office 2007 add in ribbon that imports CZTIFF images and can read the tags so users can create reports”. But I have not tested the functionality of this report generator. The only Zeiss-issued documentation related to TIFF files that we could find was a “technical information” sheet titled hosted on the research blog of former KTH PhD student.

The information in the document is interesting and sheds some light on the origins of attaching additional information in TIFF tags, but is severely outdated. Notwithstanding the poor documentation offered by the SmartSEM® publisher, other microscopists have created scripts, plugins and software that can handle TIFF images to various degrees. Most ambitious is probably by, a very well-documented Python script for reading and writing data from and to TIFF files.

The script is geared towards handling the TIFF format in general, and does not collect the specific tags generated by the SmartSEM® software, but it could probably easily be expanded upon by someone with Python familiarity. There is a MATLAB® function (should also work in Octave) that handles TIFF files, although it is mostly geared towards biophysics and LSM applications. (licensed as GNU GPL v3) imports TIFF files into MATLAB/Octave.

By Francois Nedelec of the. Older versions of the same script are also found online [, ].

Then there is also a few ImageJ plugins that can read or dump TIFF tags, •, •, and a that (in conjunction with the TIFF tags ImageJ plugin above) can set the scale for SEM images taken with the Zeiss SmartSEM® software. The supports a few different kind of tags, specifically, baseline tags are those that are listed as part of the core of TIFF, the essentials that all mainstream TIFF developers should support in their products, extension tags are those listed as part of TIFF features that may not be supported by all TIFF readers, private tags are, at least originally, allocated by Adobe for organizations that wish to store information meaningful only to that organization in a TIFF file.

[], private IFD tags if one needs more than 10 private tags or so, the TIFF specification suggests that, rather then using a large amount of private tags, one should instead allocate a single private tag, define it as datatype IFD, and use it to point to a so called “private IFD”. In that private IFD, one can next use whatever tags one wants. These private IFD tags do not need to be properly registered with Adobe, they live in a namespace of their own, private to the particular type of IFD. [boldface added] The above section is quoted from. SmartSEM® TIFF images Below is a SEM micrograph recorded using Zeiss SmartSEM® V05.04.05.00 on a (at the ).